MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus aureus
STF.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 123
bases: 2,698,428 bps
CDS: 2,464
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 2,534
Total number of protein coding genes annotated/found:
2,464
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5004|JADGKH010000042.1
SEQF5004_00880
Genome Viewer
NA
AA
480/160
276504-276983
Ribosomal RNA large subunit methyltransferase H
SEQF5004|JADGKH010000042.1
SEQF5004_00879
Genome Viewer
NA
AA
2319/773
273818-276136
hypothetical protein
SEQF5004|JADGKH010000042.1
SEQF5004_00878
Genome Viewer
NA
AA
801/267
272790-273590
Putative metallo-hydrolase YycJ
SEQF5004|JADGKH010000042.1
SEQF5004_00877
Genome Viewer
NA
AA
789/263
271613-272401
Two-component system WalR/WalK regulatory protein YycI
SEQF5004|JADGKH010000042.1
SEQF5004_00876
Genome Viewer
NA
AA
1335/445
270278-271612
hypothetical protein
SEQF5004|JADGKH010000042.1
SEQF5004_00875
Genome Viewer
NA
AA
1827/609
268459-270285
Sensor protein kinase WalK
SEQF5004|JADGKH010000042.1
SEQF5004_00874
Genome Viewer
NA
AA
702/234
267745-268446
Transcriptional regulatory protein WalR
SEQF5004|JADGKH010000042.1
SEQF5004_00871
Genome Viewer
NA
AA
1284/428
265266-266549
Adenylosuccinate synthetase
SEQF5004|JADGKH010000042.1
SEQF5004_00870
Genome Viewer
NA
AA
1401/467
263588-264988
Replicative DNA helicase
SEQF5004|JADGKH010000042.1
SEQF5004_00869
Genome Viewer
NA
AA
447/149
263110-263556
50S ribosomal protein L9
SEQF5004|JADGKH010000042.1
SEQF5004_00868
Genome Viewer
NA
AA
1968/656
261146-263113
Cyclic-di-AMP phosphodiesterase GdpP
SEQF5004|JADGKH010000042.1
SEQF5004_00867
Genome Viewer
NA
AA
924/308
260208-261131
hypothetical protein
SEQF5004|JADGKH010000042.1
SEQF5004_00866
Genome Viewer
NA
AA
969/323
258932-259900
Homoserine O-acetyltransferase
SEQF5004|JADGKH010000042.1
SEQF5004_00865
Genome Viewer
NA
AA
330/110
258242-258571
hypothetical protein
SEQF5004|JADGKH010000042.1
SEQF5004_00864
Genome Viewer
NA
AA
696/232
257550-258245
hypothetical protein
SEQF5004|JADGKH010000042.1
SEQF5004_00863
Genome Viewer
NA
AA
1287/429
255612-256898
Serine--tRNA ligase
SEQF5004|JADGKH010000042.1
SEQF5004_00862
Genome Viewer
NA
AA
1515/505
253719-255233
Histidine ammonia-lyase
SEQF5004|JADGKH010000042.1
SEQF5004_00861
Genome Viewer
NA
AA
813/271
253393-252581
ADP-dependent (S)-NAD(P)H-hydrate dehydratase
SEQF5004|JADGKH010000042.1
SEQF5004_00860
Genome Viewer
NA
AA
2664/888
249831-252494
DNA gyrase subunit A
SEQF5004|JADGKH010000042.1
SEQF5004_00859
Genome Viewer
NA
AA
1935/645
247860-249794
DNA gyrase subunit B
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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